BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G05SP1|AL427061
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1056 1733 0.0
>3x_Contig1056
Length = 3113
Score = 1733 bits (867), Expect = 0.0
Identities = 887/899 (98%), Gaps = 1/899 (0%)
Strand = Plus / Plus
Query: 1 taatctcaaaagcaaagttaatatactggagtatgccccttgcttttgcttactttccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 taatctcaaaagcaaagttaatatactggagtatgccccttgcttttgcttactttccaa 1360
Query: 61 cattttcttagctttatctcgtgatttggattcgagagcttgatagaactccagttcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1361 cattttcttagctttatctcgtgatttggattcgagagcttgatagaactctagttcatc 1420
Query: 121 tccttctaatttattagcagactcctttagatgtttttcaggaagttgtagtataggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 tccttctaatttattagcagactcctttagatgtttttcaggaagttgtagtataggttt 1480
Query: 181 gccatctatttgtgatgttttagttctgcgcaacataatagctctgagaagtacttgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 gccatctatttgtgatgttttagttctgcgcaacataatagctctgagaagtacttgcac 1540
Query: 241 ttttttcatagcacgttgccgctcgctatcattgtaatcatagggtttctttgtattcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 ttttttcatagcacgttgccgctcgctatcattgtaatcatagggtttctttgtattcaa 1600
Query: 301 aactgcaccaatatcagaatggaacttggcctctttgttgtagggaggtatcctcaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 aactgcaccaatatcagaatggaacttggcctctttgttgtagggaggtatcctcaaaaa 1660
Query: 361 cctgattaaagagtatagctcacctatgttattctgaatgggtgtgcctgataaagccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 cctgattaaagagtatagctcacctatgttattctgaatgggtgtgcctgataaagccca 1720
Query: 421 cctgaaagtcgaagagatggtacaacaggctttggctgcttgtgtctttttattttttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 cctgaaagtcgaagagatggtacaacaggctttggctgcttgtgtctttttattttttat 1780
Query: 481 attctgcgcttcatctagaataactctgtaaaawtcagaawcawtacgatagaagggaga 540
||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct: 1781 attctgcgcttcatctagaataactctgtaaaattcagaatcattacgatagaagggaga 1840
Query: 541 garatattcatcgcttgacttgacttgattcatgagctttaagtcaactgcatgcacatc 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 gaaatattcatcgcttgacttgacttgattcatgagctttaagtcaactgcatgcacatc 1900
Query: 601 gggctgatgctccccatttttccagctcaatggccaatgtttcttgaattcgcttgccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 gggctgatgctccccatttttccagctcaatggccaatgtttcttgaattcgcttgccaa 1960
Query: 661 tgtctgataagamactagcactatgtcgtattcggccaagtctttccaacttctgaattt 720
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 tgtctgataagacactagcactatgtcgtattcggccaagtctttccaacttctgaattt 2020
Query: 721 gctgctattattttcaccacctccgaatatcaccaccttaacattaamatccttctttat 780
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2021 gctgctattattttcaccacctccgaatatcaccaccttaacattaacatccttctttat 2080
Query: 781 tttgamagcgacttcgtctttccacactctcaaaamagccamaggggsaa-aaccaatgt 839
||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||||||
Sbjct: 2081 tttgacagcgacttcgtctttccacactctcaaaacagccacaggggcaacaaccaatgt 2140
Query: 840 cgttttaatcgctgacttcggttctggcttgtttgccattaataaggcgagactctgaa 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 cgttttaatcgctgacttcggttctggcttgtttgccattaataaggcgagactctgaa 2199
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5864
Number of Sequences: 1807
Number of extensions: 5864
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)